| Species: | Hordeum vulgare |
| Full name: | AAC Synergy |
| Germplasm source: |
Canada |
| Genome URL: | https://www.ncbi.nlm.nih.gov/bioproject/PRJNA665698 |
| DOI: | https://doi.org/10.1093/g3journal/jkab031 |
| Published year: | 2021-02-04 |
| Length | Annotation count | |
| Genome (excluding_ChrUn): |
3600991222 | 24425128 |
| Chr1H | 457510702 | 2869469 |
| Chr2H | 546681066 | 3756188 |
| Chr3H | 540118112 | 3454349 |
| Chr4H | 537273677 | 2307269 |
| Chr5H | 496492672 | 4419707 |
| Chr6H | 482390860 | 2993898 |
| Chr7H | 540524133 | 4624248 |
Click Chr to change figure
| CHR | Structural annotation | Sequence annotation | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Syntenic regions | Inversions | Translocations | Duplications (reference) | Duplications (query) | Not aligned (reference) | Not aligned (query) | SNPs | Insertions | Deletions | Copygains | Copylosses | Highly diverged | Tandem repeats | ||
| Chr1H | 6748 | 63 | 2256 | 23845 | 8115 | 13895 | 7562 | 2433832 | 197955 | 126837 | 1883 | 563 | 2805 | 422 | |
| Chr2H | 6595 | 59 | 2550 | 37299 | 7260 | 21497 | 7037 | 3153143 | 297074 | 157569 | 2457 | 881 | 3536 | 535 | |
| Chr3H | 7297 | 59 | 2553 | 29227 | 7867 | 17263 | 7624 | 2930573 | 246302 | 149594 | 2312 | 660 | 3068 | 423 | |
| Chr4H | 4711 | 70 | 1723 | 24253 | 5267 | 14327 | 5437 | 1898459 | 197906 | 110259 | 2199 | 429 | 2759 | 381 | |
| Chr5H | 7862 | 100 | 3008 | 34032 | 8766 | 19769 | 8615 | 3790083 | 302640 | 178518 | 2440 | 989 | 3907 | 668 | |
| Chr6H | 5853 | 67 | 1889 | 25907 | 6148 | 15064 | 5977 | 2504514 | 249494 | 128637 | 2098 | 701 | 3155 | 461 | |
| Chr7H | 8898 | 95 | 3028 | 30856 | 9850 | 18492 | 9120 | 4012663 | 284717 | 183059 | 2426 | 864 | 3575 | 659 | |
| SUM | 47964 | 513 | 17007 | 205419 | 53273 | 120307 | 51372 | 20723267 | 1776088 | 1034473 | 15815 | 5087 | 22805 | 3549 | |